MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,380
rRNA: 8
Repeat region:
tmRNA: 1
tRNA: 70
misc RNA:
Total features: 4,459
Total number of protein coding genes annotated/found:
4,380
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5013|JADGKQ010000045.1
SEQF5013_02780
Genome Viewer
NA
AA
6816/2272
9615-16430
RecBCD enzyme subunit RecD
SEQF5013|JADGKQ010000006.1
SEQF5013_03795
Genome Viewer
NA
AA
6171/2057
71968-78138
hypothetical protein
SEQF5013|JADGKQ010000016.1
SEQF5013_00690
Genome Viewer
NA
AA
5850/1950
20029-25878
hypothetical protein
SEQF5013|JADGKQ010000001.1
SEQF5013_01186
Genome Viewer
NA
AA
5745/1915
250242-244498
hypothetical protein
SEQF5013|JADGKQ010000002.1
SEQF5013_01976
Genome Viewer
NA
AA
5637/1879
218215-212579
hypothetical protein
SEQF5013|JADGKQ010000022.1
SEQF5013_01356
Genome Viewer
NA
AA
5412/1804
43459-38048
hypothetical protein
SEQF5013|JADGKQ010000022.1
SEQF5013_01353
Genome Viewer
NA
AA
5394/1798
36368-30975
hypothetical protein
SEQF5013|JADGKQ010000024.1
SEQF5013_01526
Genome Viewer
NA
AA
5130/1710
65891-60762
hypothetical protein
SEQF5013|JADGKQ010000040.1
SEQF5013_02613
Genome Viewer
NA
AA
5061/1687
24243-29303
hypothetical protein
SEQF5013|JADGKQ010000002.1
SEQF5013_01846
Genome Viewer
NA
AA
4875/1625
37864-32990
ATP-dependent DNA helicase Rep
SEQF5013|JADGKQ010000001.1
SEQF5013_01150
Genome Viewer
NA
AA
4608/1536
199346-194739
Sensor histidine kinase RcsC
SEQF5013|JADGKQ010000032.1
SEQF5013_02149
Genome Viewer
NA
AA
4569/1523
27680-32248
Ferredoxin-dependent glutamate synthase 1
SEQF5013|JADGKQ010000050.1
SEQF5013_03120
Genome Viewer
NA
AA
4446/1482
29127-33572
hypothetical protein
SEQF5013|JADGKQ010000051.1
SEQF5013_03138
Genome Viewer
NA
AA
4443/1481
25396-20954
hypothetical protein
SEQF5013|JADGKQ010000015.1
SEQF5013_00631
Genome Viewer
NA
AA
4320/1440
54568-50249
Adaptive-response sensory-kinase SasA
SEQF5013|JADGKQ010000005.1
SEQF5013_03460
Genome Viewer
NA
AA
4311/1437
94605-98915
hypothetical protein
SEQF5013|JADGKQ010000015.1
SEQF5013_00582
Genome Viewer
NA
AA
4302/1434
17985-13684
hypothetical protein
SEQF5013|JADGKQ010000020.1
SEQF5013_01214
Genome Viewer
NA
AA
4284/1428
13705-17988
DNA-directed RNA polymerase subunit beta'
SEQF5013|JADGKQ010000006.1
SEQF5013_03841
Genome Viewer
NA
AA
4281/1427
130212-125932
Sensor histidine kinase RcsC
SEQF5013|JADGKQ010000024.1
SEQF5013_01527
Genome Viewer
NA
AA
4194/1398
70087-65894
ATP-dependent RecD-like DNA helicase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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